ATCG00650 (RPS18)


Aliases : RPS18

Description : ribosomal protein S18


Gene families : OG_01_0008935 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008935_tree ,
OG_02_0009097 (LandPlants) Phylogenetic Tree(s): OG_02_0009097_tree ,
OG_03_0006280 (SeedPlants) Phylogenetic Tree(s): OG_03_0006280_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00650
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g39716.1 No alias component psRPS18 of small ribosomal subunit proteome 0.05 Archaeplastida
LOC_Os08g15308.1 No alias component psRPS18 of small ribosomal subunit proteome 0.42 Archaeplastida
LOC_Os10g21312.1 No alias component psRPS18 of small ribosomal subunit proteome 0.51 Archaeplastida
Solyc00g500022.1.1 No alias component psRPS18 of small ribosomal subunit proteome 0.25 Archaeplastida
Solyc01g017085.1.1 No alias component psRPS18 of small ribosomal subunit proteome 0.12 Archaeplastida
Zm00001e042027_P001 No alias component psRPS18 of small ribosomal subunit proteome 0.2 Archaeplastida
Zm00001e042146_P001 No alias component psRPS18 of small ribosomal subunit proteome 0.2 Archaeplastida
LOC_Os06g39716.1 No alias component psRPS18 of small ribosomal subunit proteome 0.04 LandPlants
LOC_Os08g15308.1 No alias component psRPS18 of small ribosomal subunit proteome 0.43 LandPlants
LOC_Os10g21312.1 No alias component psRPS18 of small ribosomal subunit proteome 0.5 LandPlants
Solyc00g500022.1.1 No alias component psRPS18 of small ribosomal subunit proteome 0.24 LandPlants
Solyc01g017085.1.1 No alias component psRPS18 of small ribosomal subunit proteome 0.13 LandPlants
Zm00001e042027_P001 No alias component psRPS18 of small ribosomal subunit proteome 0.2 LandPlants
Zm00001e042146_P001 No alias component psRPS18 of small ribosomal subunit proteome 0.2 LandPlants
LOC_Os06g39716.1 No alias component psRPS18 of small ribosomal subunit proteome 0.04 SeedPlants
LOC_Os08g15308.1 No alias component psRPS18 of small ribosomal subunit proteome 0.42 SeedPlants
LOC_Os10g21312.1 No alias component psRPS18 of small ribosomal subunit proteome 0.51 SeedPlants
Solyc00g500022.1.1 No alias component psRPS18 of small ribosomal subunit proteome 0.23 SeedPlants
Solyc01g017085.1.1 No alias component psRPS18 of small ribosomal subunit proteome 0.1 SeedPlants
Zm00001e042027_P001 No alias component psRPS18 of small ribosomal subunit proteome 0.21 SeedPlants
Zm00001e042146_P001 No alias component psRPS18 of small ribosomal subunit proteome 0.21 SeedPlants

Type GO Term Name Evidence Source
CC GO:0000312 plastid small ribosomal subunit TAS Interproscan
MF GO:0003735 structural constituent of ribosome TAS Interproscan
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
BP GO:0006412 translation TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009507 chloroplast TAS Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 26 75
No external refs found!