ATCG00580 (PSBE)


Aliases : PSBE

Description : photosystem II reaction center protein E


Gene families : OG_01_0006476 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006476_tree ,
OG_02_0005150 (LandPlants) Phylogenetic Tree(s): OG_02_0005150_tree ,
OG_03_0006267 (SeedPlants) Phylogenetic Tree(s): OG_03_0006267_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00580
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011530 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.13 Archaeplastida
GSVIVT01027287001 No alias No description available 0.06 Archaeplastida
LOC_Os06g39728.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.35 Archaeplastida
LOC_Os08g15322.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.36 Archaeplastida
LOC_Os10g21298.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.36 Archaeplastida
Mpzg00370.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.02 Archaeplastida
Mpzg00420.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.02 Archaeplastida
Mpzg01070.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.02 Archaeplastida
Smo137822 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.21 Archaeplastida
Solyc00g500021.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.51 Archaeplastida
Solyc00g500068.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.51 Archaeplastida
Solyc10g045230.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.51 Archaeplastida
AMTR_s00334p00011530 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.13 LandPlants
GSVIVT01027287001 No alias No description available 0.06 LandPlants
LOC_Os06g39728.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.34 LandPlants
LOC_Os08g15322.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.36 LandPlants
LOC_Os10g21298.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.36 LandPlants
Mpzg00370.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.02 LandPlants
Mpzg00420.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.02 LandPlants
Mpzg01070.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.02 LandPlants
Smo137822 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.21 LandPlants
Solyc00g500021.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.5 LandPlants
Solyc00g500068.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.5 LandPlants
Solyc10g045230.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.5 LandPlants
AMTR_s00334p00011530 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.14 SeedPlants
GSVIVT01027287001 No alias No description available 0.06 SeedPlants
LOC_Os06g39728.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.35 SeedPlants
LOC_Os08g15322.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.36 SeedPlants
LOC_Os10g21298.1 No alias component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.36 SeedPlants
Solyc00g500021.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.46 SeedPlants
Solyc00g500068.1.1 No alias component alpha/PsbE of PS-II cytochrome b559... 0.46 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
MF GO:0009055 electron transfer activity TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex TAS Interproscan
BP GO:0009769 photosynthesis, light harvesting in photosystem II TAS Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
MF GO:0020037 heme binding TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013081 PSII_cyt_b559_N 6 34
IPR013082 PSII_cytb559_asu_lum 42 79
No external refs found!