ATCG00300 (YCF9)


Aliases : YCF9

Description : YCF9


Gene families : OG_01_0007305 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007305_tree ,
OG_02_0008252 (LandPlants) Phylogenetic Tree(s): OG_02_0008252_tree ,
OG_03_0012233 (SeedPlants) Phylogenetic Tree(s): OG_03_0012233_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00300
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g58038.1 No alias component PsbZ of PS-II complex 0.08 Archaeplastida
LOC_Os02g24628.1 No alias component PsbZ of PS-II complex 0.08 Archaeplastida
LOC_Os04g16876.1 No alias component PsbZ of PS-II complex 0.08 Archaeplastida
LOC_Os10g21214.1 No alias component PsbZ of PS-II complex 0.39 Archaeplastida
Solyc01g102770.1.1 No alias component PsbZ of PS-II complex 0.09 Archaeplastida
Solyc11g050770.1.1 No alias component PsbZ of PS-II complex 0.07 Archaeplastida
LOC_Os01g58038.1 No alias component PsbZ of PS-II complex 0.08 LandPlants
LOC_Os02g24628.1 No alias component PsbZ of PS-II complex 0.08 LandPlants
LOC_Os04g16876.1 No alias component PsbZ of PS-II complex 0.08 LandPlants
LOC_Os10g21214.1 No alias component PsbZ of PS-II complex 0.39 LandPlants
Solyc01g102770.1.1 No alias component PsbZ of PS-II complex 0.09 LandPlants
Solyc11g050770.1.1 No alias component PsbZ of PS-II complex 0.07 LandPlants
LOC_Os01g58038.1 No alias component PsbZ of PS-II complex 0.08 SeedPlants
LOC_Os02g24628.1 No alias component PsbZ of PS-II complex 0.08 SeedPlants
LOC_Os04g16876.1 No alias component PsbZ of PS-II complex 0.08 SeedPlants
LOC_Os10g21214.1 No alias component PsbZ of PS-II complex 0.4 SeedPlants
Solyc01g102770.1.1 No alias component PsbZ of PS-II complex 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0015979 photosynthesis TAS Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
CC GO:0030095 chloroplast photosystem II ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002644 PSII_PsbZ 5 61
No external refs found!