ATCG00080 (PSBI)

Aliases : PSBI

Description : photosystem II reaction center protein I

Gene families : OG_01_0005416 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005416_tree ,
OG_02_0005154 (LandPlants) Phylogenetic Tree(s): OG_02_0005154_tree ,
OG_03_0003627 (SeedPlants) Phylogenetic Tree(s): OG_03_0003627_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATCG00080
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
Solyc00g500049.1.1	No alias	component PsbI of PS-II reaction center complex....	0.02	SeedPlants
Solyc00g500132.1.1	No alias	component PsbI of PS-II reaction center complex....	0.02	SeedPlants
Solyc00g500202.1.1	No alias	component PsbI of PS-II reaction center complex....	0.02	SeedPlants
Solyc00g500293.1.1	No alias	component PsbI of PS-II reaction center complex....	0.02	SeedPlants
Solyc00g500331.1.1	No alias	component PsbI of PS-II reaction center complex....	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006354	DNA-templated transcription, elongation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009539	photosystem II reaction center	TAS	Interproscan
BP	GO:0009765	photosynthesis, light harvesting	None	Extended
BP	GO:0009769	photosynthesis, light harvesting in photosystem II	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
BP	GO:0015979	photosynthesis	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016168	chlorophyll binding	TAS	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0048038	quinone binding	TAS	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003686	PSII_PsbI	1	35

External Links

No external refs found!

ATCG00080 (PSBI)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation