Pir_g64774

Description : component *(bL22m) of large mitoribosomal-subunit proteome & original description: none

Gene families : OG0005689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005689_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g64774

Target	Alias	Description	ECC score	Gene Family Method
AT4G28360	No alias	Ribosomal protein L22p/L17e family protein	0.05	OrthoFinder output from all 47 species
Adi_g057271	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cba_g00781	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
LOC_Os01g42980.1	LOC_Os01g42980	component mtRPL22 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
MA_67650g0010	No alias	component mtRPL22 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Nbi_g00529	No alias	component *(bL22m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Solyc04g017680.3.1	Solyc04g017680	component mtRPL22 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Zm00001e009387_P001	Zm00001e009387	component mtRPL22 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0072488	ammonium transmembrane transport	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011607	MGS-like_dom	13	86
IPR001063	Ribosomal_L22	161	263

External Links

No external refs found!

Pir_g64774

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation