AT5G67110 (ALC)


Aliases : ALC

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G67110
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00021p00146370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.04 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.06 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G01305 No alias No description available 0.05 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.02 Archaeplastida
Gb_27869 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_10113879g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_26114g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_29186g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 Archaeplastida
Smo39143 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e020477_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT5G01305 No alias No description available 0.04 LandPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.02 LandPlants
Gb_06182 No alias transcription factor (bHLH) 0.02 LandPlants
Gb_27869 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 LandPlants
MA_10113879g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_83500g0010 No alias transcription factor (bHLH) 0.04 LandPlants
Mp3g23300.1 No alias transcription factor (bHLH) 0.01 LandPlants
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 LandPlants
Smo39143 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.05 LandPlants
Zm00001e020477_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.02 LandPlants
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 SeedPlants
AT5G01305 No alias No description available 0.02 SeedPlants
GSVIVT01022120001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.02 SeedPlants
MA_83500g0010 No alias transcription factor (bHLH) 0.01 SeedPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity IMP Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010047 fruit dehiscence IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 97 143
No external refs found!