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  5. Pir_g64245

Pir_g64245


Description : not classified & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g64245

Target Alias Description ECC score Gene Family Method Actions
Adi_g051114 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07686 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene01421.t1 Aspi01Gene01421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24002.t1 XERICO, Aspi01Gene24002 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56880.t1 Aspi01Gene56880 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.12G062900.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g28799 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g14309 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dde_g06659 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Dde_g08169 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dde_g19799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os12g42540.1 LOC_Os12g42540 RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_68992g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g01017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24535 ATL8 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g04891 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g33048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004696 ATRING1, RING1 not classified & original description: CDS=1-576 0.03 OrthoFinder output from all 47 species
Tin_g05381 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e011004_P001 XERICO, Zm00001e011004 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023260_P001 Zm00001e023260 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 165 208
No external refs found!