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  5. Pir_g63815

Pir_g63815


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g63815
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
Ala_g36514 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.05 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.05 OrthoFinder output from all 47 species
Ceric.28G065700.1 CRR22, Ceric.28G065700 not classified & original description: pacid=50569957... 0.04 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g32452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_20746g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_452577g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06449 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33393 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33469 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44362 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo181046 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e015727_P001 Zm00001e015727 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Zm00001e016923_P001 CRR2, Zm00001e016923 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 90 120
IPR046848 E_motif 141 182
No external refs found!