1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g63662

Pir_g63662


Description : not classified & original description: none


Gene families : OG0015119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g63662

Target Alias Description ECC score Gene Family Method Actions
Aop_g70015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G054900.1 Ceric.19G054900 not classified & original description: pacid=50576359... 0.02 OrthoFinder output from all 47 species
Dac_g21873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1190 1220
IPR002885 Pentatricopeptide_repeat 491 517
IPR002885 Pentatricopeptide_repeat 1225 1255
IPR002885 Pentatricopeptide_repeat 158 183
IPR002885 Pentatricopeptide_repeat 1300 1325
IPR002885 Pentatricopeptide_repeat 287 317
IPR002885 Pentatricopeptide_repeat 1402 1420
IPR002885 Pentatricopeptide_repeat 259 282
IPR002885 Pentatricopeptide_repeat 589 634
IPR002885 Pentatricopeptide_repeat 386 431
IPR002885 Pentatricopeptide_repeat 84 131
IPR002885 Pentatricopeptide_repeat 184 228
IPR002885 Pentatricopeptide_repeat 1087 1133
IPR002885 Pentatricopeptide_repeat 1326 1373
IPR002885 Pentatricopeptide_repeat 985 1032
IPR002885 Pentatricopeptide_repeat 688 735
IPR002885 Pentatricopeptide_repeat 885 931
No external refs found!