Aliases : COB
Description : regulatory protein *(COB) of cellulose-hemicellulose network assembly & original description: none
Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G15630 | IRX6, COBL4 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.02 | OrthoFinder output from all 47 species | |
AT5G49270 | COBL9, MRH4, SHV2, DER9 | COBRA-like extracellular glycosyl-phosphatidyl... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g021949 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g10925 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g02423 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g14783 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g12365 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0051.g031370 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g01570 | SEB1, COBL7, ATSEB1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g40673 | COBL2 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g26915 | COBL1 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05951 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01008129001 | IRX6, COBL4 | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | OrthoFinder output from all 47 species | |
Gb_32178 | SEB1, COBL7, ATSEB1 | COB cellulose microfibrils and hemicellulose interaction protein | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g18910.1 | SEB1, COBL7,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g41320.1 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | OrthoFinder output from all 47 species | |
Mp1g18890.1 | COBL10 | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g20839 | COB | regulatory protein *(COB) of cellulose-hemicellulose... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g40847 | IRX6, COBL4 | regulatory protein *(COB) of cellulose-hemicellulose... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e038043_P001 | IRX6, COBL4,... | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0010215 | cellulose microfibril organization | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006918 | COBRA_pln | 2 | 106 |
No external refs found! |