AT5G65770 (LINC4)


Aliases : LINC4

Description : little nuclei4


Gene families : OG_01_0002164 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002164_tree ,
OG_02_0001522 (LandPlants) Phylogenetic Tree(s): OG_02_0001522_tree ,
OG_03_0001206 (SeedPlants) Phylogenetic Tree(s): OG_03_0001206_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G65770
Cluster HCCA: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007428001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 Archaeplastida
GSVIVT01011972001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.06 Archaeplastida
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.05 Archaeplastida
Gb_03736 No alias CRWN nuclear lamina lamin-like protein 0.02 Archaeplastida
LOC_Os01g56140.1 No alias CRWN nuclear lamina lamin-like protein 0.04 Archaeplastida
LOC_Os02g48010.1 No alias CRWN nuclear lamina lamin-like protein 0.03 Archaeplastida
Mp3g21160.1 No alias CRWN nuclear lamina lamin-like protein 0.03 Archaeplastida
Pp3c1_1360V3.1 No alias little nuclei1 0.04 Archaeplastida
Solyc02g089800.3.1 No alias CRWN nuclear lamina lamin-like protein 0.06 Archaeplastida
Solyc02g091960.4.1 No alias CRWN nuclear lamina lamin-like protein 0.09 Archaeplastida
Solyc03g045050.4.1 No alias CRWN nuclear lamina lamin-like protein 0.04 Archaeplastida
Zm00001e019705_P002 No alias CRWN nuclear lamina lamin-like protein 0.14 Archaeplastida
Zm00001e023357_P001 No alias CRWN nuclear lamina lamin-like protein 0.07 Archaeplastida
GSVIVT01007428001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 LandPlants
GSVIVT01011972001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.05 LandPlants
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 LandPlants
Gb_03736 No alias CRWN nuclear lamina lamin-like protein 0.02 LandPlants
LOC_Os01g56140.1 No alias CRWN nuclear lamina lamin-like protein 0.02 LandPlants
LOC_Os02g48010.1 No alias CRWN nuclear lamina lamin-like protein 0.03 LandPlants
Pp3c1_1360V3.1 No alias little nuclei1 0.02 LandPlants
Solyc02g089800.3.1 No alias CRWN nuclear lamina lamin-like protein 0.05 LandPlants
Solyc02g091960.4.1 No alias CRWN nuclear lamina lamin-like protein 0.09 LandPlants
Solyc03g045050.4.1 No alias CRWN nuclear lamina lamin-like protein 0.04 LandPlants
Zm00001e019705_P002 No alias CRWN nuclear lamina lamin-like protein 0.12 LandPlants
Zm00001e023357_P001 No alias CRWN nuclear lamina lamin-like protein 0.07 LandPlants
GSVIVT01007428001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 SeedPlants
GSVIVT01011972001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.05 SeedPlants
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 SeedPlants
Gb_03736 No alias CRWN nuclear lamina lamin-like protein 0.02 SeedPlants
Gb_20952 No alias CRWN nuclear lamina lamin-like protein 0.02 SeedPlants
LOC_Os01g56140.1 No alias CRWN nuclear lamina lamin-like protein 0.02 SeedPlants
LOC_Os02g48010.1 No alias CRWN nuclear lamina lamin-like protein 0.03 SeedPlants
Solyc02g089800.3.1 No alias CRWN nuclear lamina lamin-like protein 0.05 SeedPlants
Solyc02g091960.4.1 No alias CRWN nuclear lamina lamin-like protein 0.09 SeedPlants
Solyc03g045050.4.1 No alias CRWN nuclear lamina lamin-like protein 0.04 SeedPlants
Zm00001e019705_P002 No alias CRWN nuclear lamina lamin-like protein 0.09 SeedPlants
Zm00001e023357_P001 No alias CRWN nuclear lamina lamin-like protein 0.07 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005652 nuclear lamina IDA Interproscan
BP GO:0006997 nucleus organization IMP Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0034399 nuclear periphery IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!