Smo418525 (PACid_15407349)


Aliases : PACid_15407349

Description : 35.1 not assigned.no ontology S-adenosyl-L-methionine-dependent methyltransferases superfamily protein FUNCTIONS IN: methyltransferase activity, RNA binding LOCATED IN: cellular_component unknown EXPRESSED IN: 23 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p (InterPro:IPR001678), Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site (InterPro:IPR018314) BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G40000.1) Has 8976 Blast hits to 8942 proteins in 2412 species: Archae - 298 Bacteria - 6215 Metazoa - 583 Fungi - 307 Plants - 251 Viruses - 0 Other Eukaryotes - 1322 (source: NCBI BLink). & (chl4|521063 : 394.0


Gene families : OG_01_0001821 (Gene family) Phylogenetic Tree(s): OG0001821_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo418525
Cluster HCCA cluster: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
AT2G22400 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.05 Gene family
Cpa|evm.model.tig00020562.25 No alias 35.1 not assigned.no ontology... 0.03 Gene family
Cre03.g179860 No alias 35.1 not assigned.no ontology... 0.08 Gene family
LOC_Os09g29630 Os09g0471900 35.1 not assigned.no ontology... 0.07 Gene family
Solyc05g051520.3.1 Solyc05g051520.3 35.1 not assigned.no ontology... 0.06 Gene family
Solyc11g010110.2.1 Solyc11g010110.2 35.1 not assigned.no ontology... 0.02 Gene family
Zm00001d020810 GRMZM2G063517 35.1 not assigned.no ontology... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 174 354
No external refs found!