AT5G64920 (CIP8)


Aliases : CIP8

Description : COP1-interacting protein 8


Gene families : OG_01_0000041 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000041_tree ,
OG_02_0000046 (LandPlants) Phylogenetic Tree(s): OG_02_0000046_tree ,
OG_03_0001225 (SeedPlants) Phylogenetic Tree(s): OG_03_0001225_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G64920
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263520 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AT3G60080 No alias RING/U-box superfamily protein 0.11 Archaeplastida
GSVIVT01024920001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os02g55480.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g22830.2 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.03 Archaeplastida
MA_19897g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 Archaeplastida
Solyc02g089410.3.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.08 Archaeplastida
Solyc06g005650.2.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g008440.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e011788_P002 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e027319_P001 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 LandPlants
Gb_29787 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.01 LandPlants
LOC_Os03g22830.2 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.03 LandPlants
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 LandPlants
Pp3c14_25422V3.1 No alias No annotation 0.01 LandPlants
Solyc02g089410.3.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.08 LandPlants
Solyc12g008440.1.1 No alias no hits & (original description: none) 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0016567 protein ubiquitination IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 257 298
IPR039525 RNF126-like_zinc-ribbon 14 46
No external refs found!