AT5G64630 (NFB01, NFB1, MUB3.9, FAS2)

Aliases : NFB01, NFB1, MUB3.9, FAS2

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0007295 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007295_tree ,
OG_02_0008229 (LandPlants) Phylogenetic Tree(s): OG_02_0008229_tree ,
OG_03_0009397 (SeedPlants) Phylogenetic Tree(s): OG_03_0009397_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G64630
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020629.12	No alias	Chromatin assembly factor 1 subunit FAS2 homolog...	0.01	Archaeplastida
GSVIVT01026512001	No alias	Chromatin organisation.histone chaperone activities.CAF1...	0.1	Archaeplastida
MA_6422g0020	No alias	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.02	Archaeplastida
Mp4g02980.1	No alias	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.03	Archaeplastida
AMTR_s00071p00116490	evm_27.TU.AmTr_v1...	Chromatin organisation.histone chaperone activities.CAF1...	0.02	LandPlants
GSVIVT01026512001	No alias	Chromatin organisation.histone chaperone activities.CAF1...	0.1	LandPlants
LOC_Os08g01680.1	No alias	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.02	LandPlants
MA_6422g0020	No alias	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.02	LandPlants
Mp4g02980.1	No alias	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.03	LandPlants
AMTR_s00071p00116490	evm_27.TU.AmTr_v1...	Chromatin organisation.histone chaperone activities.CAF1...	0.02	SeedPlants
GSVIVT01026512001	No alias	Chromatin organisation.histone chaperone activities.CAF1...	0.1	SeedPlants
LOC_Os08g01680.1	No alias	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.02	SeedPlants
MA_6422g0020	No alias	component CAF1b/FAS2 of CAF1 histone chaperone complex	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	ISS	Interproscan
BP	GO:0000724	double-strand break repair via homologous recombination	IMP	Interproscan
BP	GO:0000725	recombinational repair	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006310	DNA recombination	IMP	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006333	chromatin assembly or disassembly	None	Extended
BP	GO:0006334	nucleosome assembly	IDA	Interproscan
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	IMP	Interproscan
BP	GO:0009555	pollen development	IGI	Interproscan
BP	GO:0009933	meristem structural organization	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010026	trichome differentiation	IMP	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031497	chromatin assembly	None	Extended
BP	GO:0031507	heterochromatin assembly	IMP	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033186	CAF-1 complex	IPI	Interproscan
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034401	chromatin organization involved in regulation of transcription	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097549	chromatin organization involved in negative regulation of transcription	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001680	WD40_repeat	10	40
IPR001680	WD40_repeat	148	181
IPR001680	WD40_repeat	57	92
IPR001680	WD40_repeat	106	140

External Links

No external refs found!

AT5G64630 (NFB01, NFB1, MUB3.9, FAS2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation