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  5. Pir_g61820

Pir_g61820


Description : LIM-type transcription factor & original description: none


Gene families : OG0001474 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001474_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g61820
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Als_g21480 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22072 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16417 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19676 WLIM1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20012 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23314 No alias LIM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g28505 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28931 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g08587 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g37521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g51058 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g31991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 6 58
No external refs found!