AT5G64330 (RPT3, NPH3, JK218)

Aliases : RPT3, NPH3, JK218

Description : Phototropic-responsive NPH3 family protein

Gene families : OG_01_0000044 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000044_tree ,
OG_02_0003027 (LandPlants) Phylogenetic Tree(s): OG_02_0003027_tree ,
OG_03_0007222 (SeedPlants) Phylogenetic Tree(s): OG_03_0007222_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G64330
Cluster	HCCA: Cluster_224

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00262560	evm_27.TU.AmTr_v1...	BTB/POZ domain-containing protein At5g48800...	0.03	Archaeplastida
AMTR_s00038p00155420	evm_27.TU.AmTr_v1...	Root phototropism protein 3 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00057p00189750	evm_27.TU.AmTr_v1...	BTB/POZ domain-containing protein At1g03010...	0.03	Archaeplastida
AMTR_s00061p00175030	evm_27.TU.AmTr_v1...	BTB/POZ domain-containing protein At5g47800...	0.02	Archaeplastida
AMTR_s00065p00211770	evm_27.TU.AmTr_v1...	BTB/POZ domain-containing protein NPY1 OS=Arabidopsis thaliana	0.03	Archaeplastida
AMTR_s00077p00161250	evm_27.TU.AmTr_v1...	Root phototropism protein 2 OS=Arabidopsis thaliana	0.05	Archaeplastida
AT1G67900	No alias	Phototropic-responsive NPH3 family protein	0.06	Archaeplastida
AT2G14820	NPY2	Phototropic-responsive NPH3 family protein	0.05	Archaeplastida
AT5G10250	DOT3	Phototropic-responsive NPH3 family protein	0.06	Archaeplastida
AT5G48130	No alias	Phototropic-responsive NPH3 family protein	0.06	Archaeplastida
AT5G67385	No alias	Phototropic-responsive NPH3 family protein	0.04	Archaeplastida
GSVIVT01000146001	No alias	BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01010983001	No alias	BTB/POZ domain-containing protein At1g03010...	0.03	Archaeplastida
GSVIVT01024542001	No alias	Root phototropism protein 2 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01031416001	No alias	BTB/POZ domain-containing protein At3g44820...	0.03	Archaeplastida
GSVIVT01037852001	No alias	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana	0.04	Archaeplastida
Gb_00052	No alias	Root phototropism protein 2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Gb_16497	No alias	BTB/POZ domain-containing protein At1g30440...	0.02	Archaeplastida
Gb_37723	No alias	BTB/POZ domain-containing protein At1g30440...	0.02	Archaeplastida
Gb_41063	No alias	Root phototropism protein 3 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os01g08130.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os02g35970.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.04	Archaeplastida
LOC_Os02g38120.1	No alias	BTB/POZ domain-containing protein At1g67900...	0.02	Archaeplastida
LOC_Os03g10800.2	No alias	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.02	Archaeplastida
LOC_Os03g22600.1	No alias	BTB/POZ domain-containing protein At1g03010...	0.06	Archaeplastida
LOC_Os03g43990.1	No alias	BTB/POZ domain-containing protein At1g30440...	0.04	Archaeplastida
LOC_Os03g55830.1	No alias	BTB/POZ domain-containing protein At5g66560...	0.05	Archaeplastida
LOC_Os04g57800.1	No alias	component BPH1 of CUL3-BTB E3 ubiquitin ligase complex	0.06	Archaeplastida
LOC_Os05g08530.1	No alias	Root phototropism protein 3 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os07g36230.1	No alias	BTB/POZ domain-containing protein At3g22104...	0.04	Archaeplastida
LOC_Os07g39530.1	No alias	BTB/POZ domain-containing protein At5g48130...	0.03	Archaeplastida
LOC_Os11g02610.1	No alias	Root phototropism protein 2 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os12g02540.1	No alias	BTB/POZ domain-containing protein At3g08570...	0.03	Archaeplastida
LOC_Os12g41910.2	No alias	BTB/POZ domain-containing protein At1g30440...	0.03	Archaeplastida
MA_10429476g0010	No alias	BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis...	0.04	Archaeplastida
MA_10430653g0010	No alias	BTB/POZ domain-containing protein At1g30440...	0.02	Archaeplastida
MA_10592g0020	No alias	BTB/POZ domain-containing protein At5g48130...	0.03	Archaeplastida
MA_135496g0010	No alias	Root phototropism protein 3 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_26192g0010	No alias	BTB/POZ domain-containing protein At5g48130...	0.05	Archaeplastida
MA_38486g0010	No alias	BTB/POZ domain-containing protein At1g30440...	0.02	Archaeplastida
MA_42230g0010	No alias	BTB/POZ domain-containing protein At1g67900...	0.04	Archaeplastida
MA_45208g0010	No alias	BTB/POZ domain-containing protein At1g30440...	0.03	Archaeplastida
MA_52004g0010	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.05	Archaeplastida
MA_90165g0010	No alias	Coleoptile phototropism protein 1 OS=Oryza sativa subsp....	0.02	Archaeplastida
MA_9526427g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp2g13430.1	No alias	BTB/POZ domain-containing protein At5g48130...	0.04	Archaeplastida
Mp5g07060.1	No alias	BTB/POZ domain-containing protein At5g48800...	0.02	Archaeplastida
Pp3c12_21560V3.1	No alias	Phototropic-responsive NPH3 family protein	0.02	Archaeplastida
Pp3c13_16380V3.1	No alias	Phototropic-responsive NPH3 family protein	0.01	Archaeplastida
Pp3c21_3700V3.1	No alias	Phototropic-responsive NPH3 family protein	0.02	Archaeplastida
Pp3c3_20030V3.1	No alias	Phototropic-responsive NPH3 family protein	0.02	Archaeplastida
Pp3c3_37660V3.1	No alias	Phototropic-responsive NPH3 family protein	0.04	Archaeplastida
Pp3c4_9940V3.1	No alias	Phototropic-responsive NPH3 family protein	0.02	Archaeplastida
Smo231529	No alias	BTB/POZ domain-containing protein At5g48800...	0.03	Archaeplastida
Smo74933	No alias	BTB/POZ domain-containing protein At5g48800...	0.02	Archaeplastida
Solyc01g105680.4.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.02	Archaeplastida
Solyc02g064720.3.1	No alias	BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis...	0.05	Archaeplastida
Solyc02g092480.4.1	No alias	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.03	Archaeplastida
Solyc05g013570.3.1	No alias	BTB/POZ domain-containing protein At1g67900...	0.06	Archaeplastida
Solyc07g043130.3.1	No alias	Root phototropism protein 2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc07g048000.3.1	No alias	BTB/POZ domain-containing protein At5g48130...	0.03	Archaeplastida
Solyc09g061250.4.1	No alias	BTB/POZ domain-containing protein At5g48800...	0.06	Archaeplastida
Solyc09g074630.3.1	No alias	BTB/POZ domain-containing protein At1g03010...	0.04	Archaeplastida
Solyc10g047530.2.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.05	Archaeplastida
Solyc10g049660.2.1	No alias	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.06	Archaeplastida
Zm00001e003063_P004	No alias	BTB/POZ domain-containing protein NPY2 OS=Arabidopsis...	0.04	Archaeplastida
Zm00001e005028_P001	No alias	BTB/POZ domain-containing protein At1g30440...	0.03	Archaeplastida
Zm00001e008748_P001	No alias	Coleoptile phototropism protein 1 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e009259_P001	No alias	Root phototropism protein 2 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e011959_P001	No alias	BTB/POZ domain-containing protein At5g66560...	0.04	Archaeplastida
Zm00001e014883_P001	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.05	Archaeplastida
Zm00001e014998_P003	No alias	BTB/POZ domain-containing protein At1g67900...	0.02	Archaeplastida
Zm00001e016726_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e019629_P002	No alias	BTB/POZ domain-containing protein At5g03250...	0.04	Archaeplastida
Zm00001e033674_P003	No alias	BTB/POZ domain-containing protein At5g47800...	0.03	Archaeplastida
Zm00001e039271_P001	No alias	Root phototropism protein 2 OS=Arabidopsis thaliana...	0.05	Archaeplastida
AT5G10250	DOT3	Phototropic-responsive NPH3 family protein	0.04	LandPlants
Gb_34273	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.02	LandPlants
LOC_Os02g35970.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.04	LandPlants
MA_135496g0010	No alias	Root phototropism protein 3 OS=Arabidopsis thaliana...	0.03	LandPlants
MA_52004g0010	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.05	LandPlants
Solyc01g105680.4.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.02	LandPlants
Solyc10g047530.2.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.05	LandPlants
Zm00001e008748_P001	No alias	Coleoptile phototropism protein 1 OS=Oryza sativa subsp....	0.02	LandPlants
Zm00001e014883_P001	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.05	LandPlants
GSVIVT01012508001	No alias	Root phototropism protein 3 OS=Arabidopsis thaliana	0.02	SeedPlants
LOC_Os02g35970.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.04	SeedPlants
MA_52004g0010	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.03	SeedPlants
Solyc10g047530.2.1	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.05	SeedPlants
Zm00001e014883_P001	No alias	component NPH3 of CUL3-BTB E3 ubiquitin ligase complex	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	RCA	Interproscan
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004871	obsolete signal transducer activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005886	plasma membrane	NAS	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	ISS	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	RCA	Interproscan
BP	GO:0009638	phototropism	IMP	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	RCA	Interproscan
BP	GO:0009785	blue light signaling pathway	IPI	Interproscan
BP	GO:0009785	blue light signaling pathway	IGI	Interproscan
BP	GO:0009825	multidimensional cell growth	RCA	Interproscan
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	RCA	Interproscan
BP	GO:0009932	cell tip growth	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0016567	protein ubiquitination	IMP	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0030522	intracellular receptor signaling pathway	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043473	pigmentation	None	Extended
BP	GO:0043476	pigment accumulation	None	Extended
BP	GO:0043478	pigment accumulation in response to UV light	None	Extended
BP	GO:0043479	pigment accumulation in tissues in response to UV light	None	Extended
BP	GO:0043480	pigment accumulation in tissues	None	Extended
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	RCA	Interproscan
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0046777	protein autophosphorylation	RCA	Interproscan
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071483	cellular response to blue light	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1904062	regulation of cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR027356	NPH3_dom	250	581

External Links

No external refs found!

AT5G64330 (RPT3, NPH3, JK218)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation