AT5G64320


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000198 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000198_tree ,
OG_02_0000086 (LandPlants) Phylogenetic Tree(s): OG_02_0000086_tree ,
OG_03_0000170 (SeedPlants) Phylogenetic Tree(s): OG_03_0000170_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G64320
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00258950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.05 Archaeplastida
AMTR_s00024p00204830 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39710... 0.02 Archaeplastida
AMTR_s00029p00214000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g09060... 0.06 Archaeplastida
AMTR_s00066p00107660 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
AMTR_s00111p00140430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g01400,... 0.08 Archaeplastida
AMTR_s00135p00057260 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g18475... 0.02 Archaeplastida
AMTR_s00221p00020810 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.04 Archaeplastida
AT1G53330 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.13 Archaeplastida
GSVIVT01011280001 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.05 Archaeplastida
Gb_00757 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.03 Archaeplastida
Gb_05553 No alias group-II intron mitochondrial splicing factor (MISF74) 0.04 Archaeplastida
Gb_06545 No alias Pentatricopeptide repeat-containing protein At2g06000... 0.07 Archaeplastida
Gb_06893 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_07822 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.03 Archaeplastida
Gb_12002 No alias Pentatricopeptide repeat-containing protein At3g48810... 0.09 Archaeplastida
Gb_14900 No alias Pentatricopeptide repeat-containing protein At4g20090... 0.04 Archaeplastida
Gb_21920 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.05 Archaeplastida
Gb_23263 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.08 Archaeplastida
Gb_35219 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.04 Archaeplastida
Gb_37573 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.07 Archaeplastida
LOC_Os01g63400.1 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.02 Archaeplastida
LOC_Os02g26890.1 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.04 Archaeplastida
LOC_Os05g04160.1 No alias Pentatricopeptide repeat-containing protein At3g48810... 0.07 Archaeplastida
LOC_Os05g11700.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
LOC_Os08g39050.1 No alias Pentatricopeptide repeat-containing protein At1g80150,... 0.12 Archaeplastida
MA_10316984g0010 No alias group-II intron mitochondrial splicing factor (MISF74) 0.05 Archaeplastida
MA_10431376g0010 No alias Pentatricopeptide repeat-containing protein At4g20090... 0.03 Archaeplastida
MA_128052g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.03 Archaeplastida
MA_137206g0010 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.04 Archaeplastida
MA_17644g0010 No alias Pentatricopeptide repeat-containing protein At2g17525,... 0.03 Archaeplastida
MA_525159g0010 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.07 Archaeplastida
MA_57592g0010 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.04 Archaeplastida
MA_71816g0020 No alias Pentatricopeptide repeat-containing protein At3g14580,... 0.06 Archaeplastida
MA_742945g0010 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.05 Archaeplastida
MA_80720g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Smo74408 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.03 Archaeplastida
Smo78295 No alias No description available 0.03 Archaeplastida
Solyc02g077650.2.1 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.08 Archaeplastida
Solyc09g061760.1.1 No alias Pentatricopeptide repeat-containing protein At2g17525,... 0.07 Archaeplastida
Solyc11g068470.3.1 No alias group-II intron mitochondrial splicing factor (MISF74) 0.04 Archaeplastida
Solyc11g073230.1.1 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.03 Archaeplastida
Solyc12g014330.1.1 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Solyc12g035170.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e003447_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e011589_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e028938_P001 No alias Pentatricopeptide repeat-containing protein At1g55890,... 0.04 Archaeplastida
Zm00001e030818_P001 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.07 Archaeplastida
Zm00001e034625_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida
AMTR_s00010p00258750 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46100... 0.02 LandPlants
AMTR_s00010p00259780 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
AMTR_s00015p00258950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.05 LandPlants
AMTR_s00024p00204830 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g39710... 0.02 LandPlants
AMTR_s00025p00221220 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g07740,... 0.02 LandPlants
AMTR_s00029p00104100 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g61870,... 0.02 LandPlants
AMTR_s00029p00214000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g09060... 0.05 LandPlants
AMTR_s00037p00138240 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g20090... 0.02 LandPlants
AMTR_s00066p00107660 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
AMTR_s00111p00140430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g01400,... 0.07 LandPlants
AMTR_s00221p00020810 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.04 LandPlants
AT1G53330 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.12 LandPlants
AT2G17525 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 LandPlants
GSVIVT01008016001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
GSVIVT01011280001 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.05 LandPlants
GSVIVT01017298001 No alias Pentatricopeptide repeat-containing protein At1g80150,... 0.05 LandPlants
GSVIVT01024665001 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.03 LandPlants
GSVIVT01031218001 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.03 LandPlants
Gb_00757 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.03 LandPlants
Gb_05553 No alias group-II intron mitochondrial splicing factor (MISF74) 0.04 LandPlants
Gb_06893 No alias Putative pentatricopeptide repeat-containing protein... 0.05 LandPlants
Gb_07822 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.03 LandPlants
Gb_12002 No alias Pentatricopeptide repeat-containing protein At3g48810... 0.12 LandPlants
Gb_14900 No alias Pentatricopeptide repeat-containing protein At4g20090... 0.04 LandPlants
Gb_21920 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.05 LandPlants
Gb_23263 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.05 LandPlants
Gb_35219 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.04 LandPlants
Gb_37573 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.06 LandPlants
Gb_38400 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 LandPlants
LOC_Os01g57630.2 No alias Pentatricopeptide repeat-containing protein At1g55890,... 0.03 LandPlants
LOC_Os01g63400.1 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.02 LandPlants
LOC_Os02g26890.1 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.04 LandPlants
LOC_Os05g04160.1 No alias Pentatricopeptide repeat-containing protein At3g48810... 0.07 LandPlants
LOC_Os05g11700.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
LOC_Os08g39050.1 No alias Pentatricopeptide repeat-containing protein At1g80150,... 0.05 LandPlants
MA_10431376g0010 No alias Pentatricopeptide repeat-containing protein At4g20090... 0.03 LandPlants
MA_125741g0010 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.03 LandPlants
MA_128052g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.03 LandPlants
MA_131324g0010 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.03 LandPlants
MA_137206g0010 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.03 LandPlants
MA_17644g0010 No alias Pentatricopeptide repeat-containing protein At2g17525,... 0.03 LandPlants
MA_525159g0010 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.07 LandPlants
MA_57592g0010 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.04 LandPlants
MA_742945g0010 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.05 LandPlants
MA_80720g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.1 LandPlants
Smo74408 No alias Pentatricopeptide repeat-containing protein At1g12775,... 0.03 LandPlants
Solyc02g077650.2.1 No alias Pentatricopeptide repeat-containing protein At5g46100... 0.1 LandPlants
Solyc04g076070.1.1 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.03 LandPlants
Solyc09g014210.3.1 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.05 LandPlants
Solyc11g068470.3.1 No alias group-II intron mitochondrial splicing factor (MISF74) 0.03 LandPlants
Solyc11g073230.1.1 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.03 LandPlants
Solyc12g014330.1.1 No alias Putative pentatricopeptide repeat-containing protein... 0.06 LandPlants
Solyc12g035170.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
Zm00001e003447_P001 No alias no hits & (original description: none) 0.05 LandPlants
Zm00001e011589_P001 No alias no hits & (original description: none) 0.06 LandPlants
Zm00001e027557_P001 No alias Pentatricopeptide repeat-containing protein At3g48810... 0.04 LandPlants
Zm00001e028732_P001 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.02 LandPlants
Zm00001e028938_P001 No alias Pentatricopeptide repeat-containing protein At1g55890,... 0.02 LandPlants
Zm00001e030818_P001 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.07 LandPlants
Zm00001e034625_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 LandPlants
AMTR_s00010p00259780 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 SeedPlants
AMTR_s00015p00258950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.03 SeedPlants
AMTR_s00025p00221220 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g07740,... 0.02 SeedPlants
AMTR_s00029p00214000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g09060... 0.03 SeedPlants
AMTR_s00066p00107660 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 SeedPlants
AMTR_s00111p00140430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g01400,... 0.04 SeedPlants
AMTR_s00221p00020810 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16420,... 0.01 SeedPlants
AT1G07740 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 SeedPlants
AT1G74580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 SeedPlants
AT4G01400 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 SeedPlants
GSVIVT01008016001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 SeedPlants
GSVIVT01024665001 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.03 SeedPlants
Gb_07822 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.03 SeedPlants
Gb_12002 No alias Pentatricopeptide repeat-containing protein At3g48810... 0.08 SeedPlants
Gb_21920 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.05 SeedPlants
Gb_37573 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.03 SeedPlants
Gb_38399 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.03 SeedPlants
Gb_38400 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 SeedPlants
LOC_Os02g26890.1 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.02 SeedPlants
MA_125741g0010 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.03 SeedPlants
MA_131324g0010 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.03 SeedPlants
MA_525159g0010 No alias Pentatricopeptide repeat-containing protein At1g07740,... 0.07 SeedPlants
MA_742945g0010 No alias Pentatricopeptide repeat-containing protein At5g16420,... 0.05 SeedPlants
MA_80720g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 SeedPlants
Solyc04g076070.1.1 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.03 SeedPlants
Solyc09g014210.3.1 No alias Pentatricopeptide repeat-containing protein At3g09060... 0.04 SeedPlants
Solyc11g068470.3.1 No alias group-II intron mitochondrial splicing factor (MISF74) 0.03 SeedPlants
Solyc12g014330.1.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 SeedPlants
Solyc12g035170.3.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 SeedPlants
Zm00001e011589_P001 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e027557_P001 No alias Pentatricopeptide repeat-containing protein At3g48810... 0.04 SeedPlants
Zm00001e030818_P001 No alias Pentatricopeptide repeat-containing protein At5g18475... 0.02 SeedPlants
Zm00001e034625_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 218 248
IPR002885 Pentatricopeptide_repeat 250 299
IPR002885 Pentatricopeptide_repeat 667 713
IPR002885 Pentatricopeptide_repeat 528 576
IPR002885 Pentatricopeptide_repeat 457 505
IPR002885 Pentatricopeptide_repeat 597 646
IPR002885 Pentatricopeptide_repeat 387 436
IPR002885 Pentatricopeptide_repeat 350 380
IPR002885 Pentatricopeptide_repeat 316 345
No external refs found!