1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g61344

Pir_g61344


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g61344

Target Alias Description ECC score Gene Family Method Actions
Adi_g058542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077328 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11282 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11380 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58990 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g23955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g19547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75123 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.03 OrthoFinder output from all 47 species
Ceric.23G007100.1 Ceric.23G007100 not classified & original description: pacid=50611480... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g22785 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09544 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26775 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13365 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007662 CRR22 not classified & original description: CDS=517-2514 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013724 No alias not classified & original description: CDS=1-1671 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1367.g028026 No alias not classified & original description: CDS=1-1854 0.03 OrthoFinder output from all 47 species
Sam_g07064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04234 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16921 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 377 403
IPR002885 Pentatricopeptide_repeat 347 367
IPR002885 Pentatricopeptide_repeat 789 811
IPR002885 Pentatricopeptide_repeat 465 486
IPR002885 Pentatricopeptide_repeat 490 538
IPR002885 Pentatricopeptide_repeat 261 306
IPR002885 Pentatricopeptide_repeat 601 648
IPR002885 Pentatricopeptide_repeat 814 862
IPR002885 Pentatricopeptide_repeat 160 206
IPR002885 Pentatricopeptide_repeat 715 759
No external refs found!