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  5. Pir_g60948

Pir_g60948 (CDF3)


Aliases : CDF3

Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g60948

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00038440 HCA2, DOF5.6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT5G02460 No alias Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
Ala_g27970 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15817 No alias transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14979 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08068 CDF2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18959.t1 ADOF1, DOF1,... transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34893.t1 OBP4, Aspi01Gene34893 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37574.t1 OBP3, Aspi01Gene37574 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10006 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g06526 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g20913 No alias transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01245 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27128 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20867 CDF3 Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_23561 TMO6 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os06g17410.1 ADOF2, DOF2,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Lfl_g01645 CDF2 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04123 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16402 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29167 CDF2 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g17090 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20737 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32243 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33176 No alias transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42354 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18526 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19390 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096120.3.1 DAG1, Solyc01g096120 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Spa_g49511 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28492 CDF2 transcription factor *(DOF) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e004809_P001 CDF3, Zm00001e004809 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e005785_P001 ADOF2, DOF2,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e012437_P001 ADOF1, DOF1,... transcription factor (DOF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 127 182
No external refs found!