AT5G63470 (NF-YC4)

Aliases : NF-YC4

Description : nuclear factor Y, subunit C4

Gene families : OG_01_0000443 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000443_tree ,
OG_02_0000515 (LandPlants) Phylogenetic Tree(s): OG_02_0000515_tree ,
OG_03_0000553 (SeedPlants) Phylogenetic Tree(s): OG_03_0000553_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G63470
Cluster	HCCA: Cluster_224

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01008570001	No alias	Nuclear transcription factor Y subunit C-1...	0.04	Archaeplastida
MA_8756989g0010	No alias	component NF-YC of NF-Y transcription factor complex	0.06	Archaeplastida
Mp1g01960.1	No alias	component NF-YC of NF-Y transcription factor complex	0.02	Archaeplastida
Mp1g04550.1	No alias	component NF-YC of NF-Y transcription factor complex	0.03	Archaeplastida
GSVIVT01008570001	No alias	Nuclear transcription factor Y subunit C-1...	0.04	LandPlants
MA_8756989g0010	No alias	component NF-YC of NF-Y transcription factor complex	0.06	LandPlants
Mp1g04550.1	No alias	component NF-YC of NF-Y transcription factor complex	0.03	LandPlants
GSVIVT01008570001	No alias	Nuclear transcription factor Y subunit C-1...	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	IC	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	ISS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003958	CBFA_NFYB_domain	78	141

External Links

No external refs found!

AT5G63470 (NF-YC4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation