AT5G63420 (emb2746)


Aliases : emb2746

Description : RNA-metabolising metallo-beta-lactamase family protein


Gene families : OG_01_0006288 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006288_tree ,
OG_02_0005831 (LandPlants) Phylogenetic Tree(s): OG_02_0005831_tree ,
OG_03_0005199 (SeedPlants) Phylogenetic Tree(s): OG_03_0005199_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G63420
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.11 Archaeplastida
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.14 Archaeplastida
Gb_26634 No alias exo-/endoribonuclease (RNase J) 0.03 Archaeplastida
Gb_29169 No alias exo-/endoribonuclease (RNase J) 0.05 Archaeplastida
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.07 Archaeplastida
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.1 Archaeplastida
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.09 Archaeplastida
Pp3c20_9790V3.1 No alias RNA-metabolising metallo-beta-lactamase family protein 0.23 Archaeplastida
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.14 Archaeplastida
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.12 Archaeplastida
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.17 Archaeplastida
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.1 LandPlants
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.14 LandPlants
Gb_26634 No alias exo-/endoribonuclease (RNase J) 0.03 LandPlants
Gb_29169 No alias exo-/endoribonuclease (RNase J) 0.04 LandPlants
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.07 LandPlants
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.08 LandPlants
Mp3g10830.1 No alias exo-/endoribonuclease (RNase J) 0.09 LandPlants
Pp3c20_9790V3.1 No alias RNA-metabolising metallo-beta-lactamase family protein 0.2 LandPlants
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.12 LandPlants
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.12 LandPlants
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.17 LandPlants
AMTR_s00009p00241540 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.ribonuclease... 0.1 SeedPlants
GSVIVT01008515001 No alias Vesicle trafficking.target membrane tethering.DSL1... 0.14 SeedPlants
Gb_26634 No alias exo-/endoribonuclease (RNase J) 0.03 SeedPlants
Gb_29169 No alias exo-/endoribonuclease (RNase J) 0.04 SeedPlants
LOC_Os02g33610.1 No alias exo-/endoribonuclease (RNase J) 0.07 SeedPlants
MA_10429859g0010 No alias exo-/endoribonuclease (RNase J) 0.08 SeedPlants
Solyc03g111260.3.1 No alias exo-/endoribonuclease (RNase J) 0.12 SeedPlants
Zm00001e013900_P001 No alias exo-/endoribonuclease (RNase J) 0.12 SeedPlants
Zm00001e025070_P003 No alias exo-/endoribonuclease (RNase J) 0.16 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISS Interproscan
BP GO:0008152 metabolic process ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0009793 embryo development ending in seed dormancy NAS Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0045333 cellular respiration RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 134 269
IPR011108 RMMBL 464 496
No external refs found!