Pir_g60403


Description : component *(eS1) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001731 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001731_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g60403

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271660 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT3G04840 No alias Ribosomal protein S3Ae 0.07 OrthoFinder output from all 47 species
AT4G34670 No alias Ribosomal protein S3Ae 0.08 OrthoFinder output from all 47 species
Adi_g124961 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g05100 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0087.g042272 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g21209 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.10G049700.1 Ceric.10G049700 component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ceric.32G043000.1 Ceric.32G043000 component *(eS1) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Cre13.g568650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g13329 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dcu_g29549 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g40359 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01018024001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01021836001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
LOC_Os02g18550.1 LOC_Os02g18550 component RPS3a of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os03g10340.1 LOC_Os03g10340 component RPS3a of SSU proteome 0.06 OrthoFinder output from all 47 species
LOC_Os12g21798.1 LOC_Os12g21798 component RPS3a of SSU proteome 0.06 OrthoFinder output from all 47 species
MA_31004g0010 No alias component RPS3a of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp6g02810.1 No alias component RPS3a of SSU proteome 0.05 OrthoFinder output from all 47 species
Msp_g05152 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Nbi_g15011 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Pp3c11_17260V3.1 Pp3c11_17260 Ribosomal protein S3Ae 0.04 OrthoFinder output from all 47 species
Pp3c22_18300V3.1 Pp3c22_18300 Ribosomal protein S3Ae 0.03 OrthoFinder output from all 47 species
Ppi_g08695 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Ppi_g17698 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025749 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Sam_g07668 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g07669 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g14495 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g30070 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo271906 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g097900.3.1 Solyc03g097900 component RPS3a of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc06g072490.3.1 Solyc06g072490 component RPS3a of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g05776 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g01747 No alias component *(eS1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Zm00001e038777_P001 Zm00001e038777 component RPS3a of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 16 220
No external refs found!