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  5. Pir_g59459

Pir_g59459


Description : regulatory factor *(NCP/RCB) of plastid-encoded RNA polymerase activity & original description: none


Gene families : OG0004780 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004780_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g59459

Target Alias Description ECC score Gene Family Method Actions
AT2G31840 No alias Thioredoxin superfamily protein 0.03 OrthoFinder output from all 47 species
GSVIVT01028374001 No alias Thioredoxin-like fold domain-containing protein MRL7,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g61320.1 LOC_Os01g61320 Thioredoxin-like fold domain-containing protein MRL7... 0.02 OrthoFinder output from all 47 species
LOC_Os05g34470.1 LOC_Os05g34470 Thioredoxin-like fold domain-containing protein MRL7L... 0.02 OrthoFinder output from all 47 species
Nbi_g08045 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.04 OrthoFinder output from all 47 species
Solyc04g071420.3.1 Solyc04g071420 Thioredoxin-like fold domain-containing protein MRL7L,... 0.03 OrthoFinder output from all 47 species
Spa_g25425 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Tin_g13854 No alias regulatory factor *(NCP/RCB) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Zm00001e019402_P001 Zm00001e019402 Thioredoxin-like fold domain-containing protein MRL7... 0.06 OrthoFinder output from all 47 species
Zm00001e027051_P004 Zm00001e027051 Thioredoxin-like fold domain-containing protein MRL7L... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!