Smo417263 (PACid_15402303)


Aliases : PACid_15402303

Description : 34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12) CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525) BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1) Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615 Bacteria - 304057 Metazoa - 8776 Fungi - 6428 Plants - 5794 Viruses - 2 Other Eukaryotes - 45311 (source: NCBI BLink). & (chl4|516135 : 801.0


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo417263
Cluster HCCA cluster: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.03 Gene family
AT1G15520 ABCG40, PDR12,... pleiotropic drug resistance 12 0.02 Gene family
AT2G29940 ATPDR3, PDR3 pleiotropic drug resistance 3 0.03 Gene family
AT2G36380 PDR6, ATPDR6 pleiotropic drug resistance 6 0.07 Gene family
AT3G30842 ATPDR10, PDR10 pleiotropic drug resistance 10 0.02 Gene family
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.02 Gene family
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Gene family
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Gene family
Cre01.g007000 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Cre07.g313250 No alias 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
GSVIVT01017198001 No alias 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
GSVIVT01017201001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01031314001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01033804001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01034746001 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
LOC_Os01g24010 Os01g0342700,... 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g42410 Os01g0609900 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os09g16330 Os09g0332700 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os11g37700 Os11g0587600 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10427683g0010 No alias No description available 0.02 Gene family
MA_10432311g0010 No alias No description available 0.04 Gene family
MA_135152g0010 No alias No description available 0.02 Gene family
MA_38272g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_598099g0010 No alias No description available 0.01 Gene family
Solyc05g053610.3.1 Solyc05g053610.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc08g067620.3.1 Solyc08g067620.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc09g091670.3.1 Solyc09g091670.3 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc11g067000.2.1 Solyc11g067000.2 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc12g019620.2.1 Solyc12g019620.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g098210.2.1 Solyc12g098210.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d025012 GRMZM2G319138 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d031724 GRMZM2G477872 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d043598 GRMZM2G000614 34.16 transport.ABC transporters and multidrug... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 167 349
No external refs found!