AT5G62190 (PRH75)


Aliases : PRH75

Description : DEAD box RNA helicase (PRH75)


Gene families : OG_01_0000607 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000607_tree ,
OG_02_0003428 (LandPlants) Phylogenetic Tree(s): OG_02_0003428_tree ,
OG_03_0003705 (SeedPlants) Phylogenetic Tree(s): OG_03_0003705_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G62190
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00191130 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.04 Archaeplastida
AMTR_s00092p00127820 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.04 Archaeplastida
Cre02.g118300 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 Archaeplastida
GSVIVT01000821001 No alias RNA processing.organelle machineries.RNA... 0.04 Archaeplastida
Pp3c2_2840V3.1 No alias DEAD box RNA helicase (RH3) 0.02 Archaeplastida
Zm00001e018107_P001 No alias RNA helicase (PMH) 0.05 Archaeplastida
Zm00001e034728_P002 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.05 Archaeplastida
AMTR_s00069p00191130 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.04 LandPlants
MA_17924g0010 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 LandPlants
Smo150370 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 LandPlants
Zm00001e034728_P002 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.05 LandPlants
AMTR_s00069p00191130 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.04 SeedPlants
Gb_39948 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 SeedPlants
MA_17924g0010 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 SeedPlants
Zm00001e034728_P002 No alias DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.05 SeedPlants

Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation RCA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005730 nucleolus IDA Interproscan
BP GO:0016070 RNA metabolic process TAS Interproscan
MF GO:0017151 DEAD/H-box RNA helicase binding ISS Interproscan
BP GO:0051604 protein maturation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012562 GUCT 530 626
IPR011545 DEAD/DEAH_box_helicase_dom 120 297
IPR001650 Helicase_C 343 441
No external refs found!