Pir_g58931

Description : not classified & original description: none

Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g58931
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
Aev_g20613	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ala_g05058	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g22292	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g15333	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g69036	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g17683	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18535	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g31569	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g66333	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pp3c4_27890V3.1	Pp3c4_27890	No annotation	0.01	OrthoFinder output from all 47 species
Sam_g01340	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g13984	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g20008	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g22751	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g48236	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	IEP	HCCA
BP	GO:0000077	DNA damage checkpoint signaling	IEP	HCCA
MF	GO:0000287	magnesium ion binding	IEP	HCCA
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	HCCA
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006310	DNA recombination	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
BP	GO:0010948	negative regulation of cell cycle process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
CC	GO:0030896	checkpoint clamp complex	IEP	HCCA
BP	GO:0031570	DNA integrity checkpoint signaling	IEP	HCCA
CC	GO:0032299	ribonuclease H2 complex	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0042770	signal transduction in response to DNA damage	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901988	negative regulation of cell cycle phase transition	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	27	127

External Links

No external refs found!

Pir_g58931

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation