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  5. Pir_g58424

Pir_g58424


Description : not classified & original description: none


Gene families : OG0005967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g58424
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 OrthoFinder output from all 47 species
Aop_g21865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G031400.1 Ceric.16G031400 not classified & original description: pacid=50589889... 0.03 OrthoFinder output from all 47 species
Dcu_g20213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 OrthoFinder output from all 47 species
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 OrthoFinder output from all 47 species
Nbi_g36090 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 553 580
IPR002885 Pentatricopeptide_repeat 443 469
IPR002885 Pentatricopeptide_repeat 587 612
IPR002885 Pentatricopeptide_repeat 319 340
IPR002885 Pentatricopeptide_repeat 621 648
IPR002885 Pentatricopeptide_repeat 143 166
IPR002885 Pentatricopeptide_repeat 173 198
IPR002885 Pentatricopeptide_repeat 761 804
IPR002885 Pentatricopeptide_repeat 205 250
IPR002885 Pentatricopeptide_repeat 679 736
No external refs found!