AT5G61270 (PIF7)


Aliases : PIF7

Description : phytochrome-interacting factor7


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G61270
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
LOC_Os05g04740.2 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Mp5g18910.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 LandPlants
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.01 LandPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.05 LandPlants
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.01 LandPlants
LOC_Os10g40740.1 No alias transcription factor (bHLH) 0.01 LandPlants
Mp5g09710.1 No alias transcription factor (bHLH) 0.01 LandPlants
Mp5g18910.1 No alias transcription factor (bHLH) 0.07 LandPlants
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 LandPlants
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 LandPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc03g121240.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 SeedPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.05 SeedPlants
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.01 SeedPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003690 double-stranded DNA binding IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0009416 response to light stimulus IDA Interproscan
BP GO:0009704 de-etiolation IMP Interproscan
CC GO:0016607 nuclear speck IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 171 216
No external refs found!