1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g58277

Pir_g58277 (ABCC12, MRP13, ATMRP13)


Aliases : ABCC12, MRP13, ATMRP13

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g58277
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00223220 MRP6, ATMRP6,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Adi_g022454 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19281 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25843 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02929 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20294 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22437.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26411.t1 EST3, MRP4,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64199.t1 MRP10, ATMRP10,... subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67983.t1 ATMRP12, MRP12,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19912 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020684.9 ABCC1, ATABCC1,... Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
GSVIVT01021590001 ABCC12, MRP13, ATMRP13 ABC transporter C family member 12 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g52900.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
LOC_Os11g05700.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Nbi_g06334 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g29525 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g32692 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35210 ATMRP14, ABCC10, MRP14 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06508 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010393 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: CDS=2-4279 0.02 OrthoFinder output from all 47 species
Smo144775 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo163776 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo402326 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc07g065320.4.1 ABCC3, ATMRP3,... subfamily ABCC transporter 0.04 OrthoFinder output from all 47 species
Tin_g12692 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23395 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038918_P002 ABCC3, ATMRP3,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 450 585
IPR003439 ABC_transporter-like_ATP-bd 1111 1261
IPR011527 ABC1_TM_dom 782 1043
IPR011527 ABC1_TM_dom 98 347
No external refs found!