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  5. AT5G60980

AT5G60980


Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain


Gene families : OG_01_0000605 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000605_tree ,
OG_02_0001455 (LandPlants) Phylogenetic Tree(s): OG_02_0001455_tree ,
OG_03_0001520 (SeedPlants) Phylogenetic Tree(s): OG_03_0001520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60980
Cluster HCCA: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00228400 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cpa|evm.model.tig00000829.14 No alias No description available 0.04 Archaeplastida
LOC_Os04g30430.1 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
MA_10429469g0010 No alias mRNA endoribonuclease (G3BP) 0.07 Archaeplastida
MA_4039171g0010 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
Pp3c8_6680V3.1 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.04 Archaeplastida
Solyc06g083730.3.1 No alias mRNA endoribonuclease (G3BP) 0.1 Archaeplastida
Zm00001e022613_P001 No alias mRNA endoribonuclease (G3BP) 0.07 Archaeplastida
Zm00001e040697_P001 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
LOC_Os04g30430.1 No alias mRNA endoribonuclease (G3BP) 0.03 LandPlants
MA_10429469g0010 No alias mRNA endoribonuclease (G3BP) 0.06 LandPlants
MA_1896g0010 No alias mRNA endoribonuclease (G3BP) 0.02 LandPlants
MA_4039171g0010 No alias mRNA endoribonuclease (G3BP) 0.04 LandPlants
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.04 LandPlants
Pp3c8_6680V3.1 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.04 LandPlants
Zm00001e022613_P001 No alias mRNA endoribonuclease (G3BP) 0.05 LandPlants
Zm00001e040697_P001 No alias mRNA endoribonuclease (G3BP) 0.02 LandPlants
LOC_Os04g30430.1 No alias mRNA endoribonuclease (G3BP) 0.03 SeedPlants
MA_10429469g0010 No alias mRNA endoribonuclease (G3BP) 0.05 SeedPlants
MA_4039171g0010 No alias mRNA endoribonuclease (G3BP) 0.04 SeedPlants
Zm00001e008436_P002 No alias mRNA endoribonuclease (G3BP) 0.02 SeedPlants
Zm00001e022613_P001 No alias mRNA endoribonuclease (G3BP) 0.05 SeedPlants
Zm00001e040697_P001 No alias mRNA endoribonuclease (G3BP) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
BP GO:0006913 nucleocytoplasmic transport ISS Interproscan
BP GO:0009737 response to abscisic acid IDA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 295 352
IPR002075 NTF2 15 131
No external refs found!