AT5G60790 (ATGCN1, GCN1)


Aliases : ATGCN1, GCN1

Description : ABC transporter family protein


Gene families : OG_01_0001462 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001462_tree ,
OG_02_0003606 (LandPlants) Phylogenetic Tree(s): OG_02_0003606_tree ,
OG_03_0004111 (SeedPlants) Phylogenetic Tree(s): OG_03_0004111_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60790
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00263550 evm_27.TU.AmTr_v1... ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00000383.51 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Mp6g18410.1 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c5_11340V3.1 No alias ABC transporter family protein 0.01 Archaeplastida
Smo154355 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Mp6g18410.1 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.04 LandPlants
Pp3c5_11340V3.1 No alias ABC transporter family protein 0.01 LandPlants
Smo154355 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006007 glucose catabolic process RCA Interproscan
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 396 527
IPR003439 ABC_transporter-like 89 241
IPR032781 ABC_tran_Xtn 280 352
No external refs found!