- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00210570 | EMB2758 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g099249 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g44555 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g31192 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g26513 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06984 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g68065 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68078 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016150 | No alias | not classified & original description: CDS=1-2547 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0064.g035591 | CRR2 | not classified & original description: CDS=306-1889 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0229.g059121 | CRR22 | not classified & original description: CDS=1-2070 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11729 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20828 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g45942 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G001700.1 | Ceric.28G001700 | not classified & original description: pacid=50570577... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G022100.1 | Ceric.39G022100 | not classified & original description: pacid=50582510... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16810 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17143 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12101 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g49830.1 | LOC_Os02g49830 | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g44793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06639 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_138190g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_14938g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_2473g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| MA_25584g0010 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_683665g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28724 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g39079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g32070 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g09779 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13334 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17077 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03223 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06986 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g18663 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29479 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53939 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59214 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000724 | No alias | not classified & original description: CDS=90-728 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07050 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49275 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50801 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53542 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003919 | FMN adenylyltransferase activity | IEP | HCCA |
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0070566 | adenylyltransferase activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 124 | 171 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 271 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 372 |
| IPR002885 | Pentatricopeptide_repeat | 21 | 69 |
| IPR002885 | Pentatricopeptide_repeat | 98 | 120 |
| IPR002885 | Pentatricopeptide_repeat | 402 | 424 |
| IPR002885 | Pentatricopeptide_repeat | 199 | 224 |
| No external refs found! |