Pir_g57688


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57688

Target Alias Description ECC score Gene Family Method Actions
Adi_g003868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene25992.t1 Aspi01Gene25992 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g77657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.05 OrthoFinder output from all 47 species
Ceric.18G077100.1 Ceric.18G077100 not classified & original description: pacid=50621411... 0.05 OrthoFinder output from all 47 species
Ceric.20G048700.1 CRR22, Ceric.20G048700 not classified & original description: pacid=50567179... 0.06 OrthoFinder output from all 47 species
Ceric.21G053500.1 Ceric.21G053500 not classified & original description: pacid=50604142... 0.06 OrthoFinder output from all 47 species
Ceric.35G030500.1 Ceric.35G030500 not classified & original description: pacid=50580789... 0.05 OrthoFinder output from all 47 species
Dac_g16781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g13254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g46457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03545 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.04 OrthoFinder output from all 47 species
Gb_05982 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_06576 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Lfl_g04255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03158 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g25355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34904 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23429 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001030 No alias not classified & original description: CDS=1-1857 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018665 No alias not classified & original description: CDS=8-2563 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021374 No alias not classified & original description: CDS=1-1881 0.02 OrthoFinder output from all 47 species
Smo100216 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g07289 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g10134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005071_P002 OSB1, Zm00001e005071 ssDNA-binding protein (OSB) 0.08 OrthoFinder output from all 47 species
Zm00001e040855_P003 Zm00001e040855 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 72 96
IPR002885 Pentatricopeptide_repeat 174 198
IPR002885 Pentatricopeptide_repeat 275 297
IPR002885 Pentatricopeptide_repeat 199 247
IPR002885 Pentatricopeptide_repeat 301 347
IPR002885 Pentatricopeptide_repeat 98 144
No external refs found!