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  5. Pir_g57526

Pir_g57526


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57526

Target Alias Description ECC score Gene Family Method Actions
AT3G50140 No alias Plant protein of unknown function (DUF247) 0.06 OrthoFinder output from all 47 species
Ala_g13692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g29496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17823 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28439 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02375 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene22026.t1 Aspi01Gene22026 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55382.t1 Aspi01Gene55382 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g41114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_20052 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_36110 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g38190.1 LOC_Os01g38190 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os11g33394.1 LOC_Os11g33394 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g33970.1 LOC_Os11g33970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g66142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32235 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g057260.4.1 Solyc01g057260 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g10857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014020_P001 Zm00001e014020 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 33 461
No external refs found!