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  5. Pir_g57523

Pir_g57523


Description : component *(uL4) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0002398 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002398_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57523

Target Alias Description ECC score Gene Family Method Actions
AT5G02870 No alias Ribosomal protein L4/L1 family 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.53 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre09.g397697 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder output from all 47 species
Mp4g20310.1 No alias component RPL4 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Sam_g13132 No alias component *(uL4) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g14297 No alias component *(uL4) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e005988_P001 Zm00001e005988 component RPL4 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR025755 Ribos_L4_C_dom 274 347
IPR002136 Ribosomal_L4/L1e 22 260
No external refs found!