AT5G60450 (ARF4)


Aliases : ARF4

Description : auxin response factor 4


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0000395 (LandPlants) Phylogenetic Tree(s): OG_02_0000395_tree ,
OG_03_0002431 (SeedPlants) Phylogenetic Tree(s): OG_03_0002431_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G60450
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00198750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01021552001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
GSVIVT01025198001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
Gb_31132 No alias transcription factor (ARF) 0.05 Archaeplastida
Gb_32864 No alias transcription factor (ARF) 0.02 Archaeplastida
Gb_39685 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os04g36054.1 No alias transcription factor (ARF) 0.07 Archaeplastida
MA_2237g0020 No alias transcription factor (ARF) 0.04 Archaeplastida
MA_69854g0010 No alias transcription factor (ARF) 0.03 Archaeplastida
Mp1g12750.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c14_16990V3.1 No alias auxin response factor 6 0.04 Archaeplastida
Smo404004 No alias No description available 0.03 Archaeplastida
Solyc05g047460.3.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc05g056040.3.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Solyc06g075150.3.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Solyc08g082630.3.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc09g007810.4.1 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e004554_P002 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e012670_P001 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e030290_P005 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e030325_P003 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e041248_P001 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os04g36054.1 No alias transcription factor (ARF) 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0010050 vegetative phase change IGI Interproscan
BP GO:0010158 abaxial cell fate specification IGI Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 177 278
IPR010525 Auxin_resp 302 383
No external refs found!