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  5. Pir_g57199

Pir_g57199 (LAC4, IRX12, ATLMCO4, LMCO4)


Aliases : LAC4, IRX12, ATLMCO4, LMCO4

Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor & original description: none


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g57199
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AT2G30210 LAC3 laccase 3 0.04 OrthoFinder output from all 47 species
Aev_g39973 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ala_g22403 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aob_g32830 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11313.t1 LAC11, Aspi01Gene11313 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025913 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Azfi_s0241.g059773 LAC16 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Cba_g02610 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Cba_g17386 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ceric.1Z032500.1 ATLAC17, LAC17,... EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.32G014200.1 LAC10, Ceric.32G014200 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dac_g09575 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g05614 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g39882 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
GSVIVT01033191001 LAC11 Laccase-11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_05999 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38390.1 ATLAC17, LAC17,... Putative laccase-11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g14897 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Lfl_g19899 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Lfl_g22723 LAC10 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Lfl_g38406 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
MA_10427033g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_75861g0010 LAC1, ATLAC1 Laccase-1 OS=Arabidopsis thaliana (sp|q9lms3|lac1_arath... 0.02 OrthoFinder output from all 47 species
Msp_g15703 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Nbi_g17065 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ore_g23776 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ore_g42145 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g06428 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Ppi_g10900 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0212.g025935 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Tin_g21222 ATLAC17, LAC17 EC_1.10 oxidoreductase acTing on diphenol or related... 0.04 OrthoFinder output from all 47 species
Tin_g40230 ATLAC17, LAC17 EC_1.10 oxidoreductase acTing on diphenol or related... 0.03 OrthoFinder output from all 47 species
Zm00001e021354_P001 LAC7, Zm00001e021354 Laccase-25 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e031826_P001 ATLAC17, LAC17,... lignin laccase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001117 Cu-oxidase_2nd 164 314
IPR011707 Cu-oxidase_N 34 147
IPR011706 Cu-oxidase_C 438 551
No external refs found!