Smo416356 (PACid_15422407)


Aliases : PACid_15422407

Description : No description available


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo416356
Cluster HCCA cluster: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AT2G35930 PUB23 plant U-box 23 0.02 Gene family
AT3G11840 PUB24 plant U-box 24 0.02 Gene family
AT3G19380 PUB25 plant U-box 25 0.04 Gene family
AT3G52450 PUB22 plant U-box 22 0.02 Gene family
GSVIVT01011139001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01011140001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01026764001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
GSVIVT01031720001 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
LOC_Os04g58920 Os04g0686000 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_10432179g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_10432813g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_200041g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
MA_212555g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_69133g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g007020.3.1 Solyc01g007020.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc01g007030.3.1 Solyc01g007030.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc01g007050.2.1 Solyc01g007050.2 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc04g071030.1.1 Solyc04g071030.1 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.02 Gene family
Solyc06g074140.1.1 Solyc06g074140.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc11g068920.1.1 Solyc11g068920.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc11g068940.1.1 Solyc11g068940.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Zm00001d023480 GRMZM2G031624 35.1 not assigned.no ontology TTF-type zinc finger... 0.02 Gene family
Zm00001d050689 GRMZM2G127690 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 58 121
No external refs found!