AT5G58500 (LSH5)


Aliases : LSH5

Description : Protein of unknown function (DUF640)


Gene families : OG_01_0000579 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000579_tree ,
OG_02_0000324 (LandPlants) Phylogenetic Tree(s): OG_02_0000324_tree ,
OG_03_0000239 (SeedPlants) Phylogenetic Tree(s): OG_03_0000239_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G58500
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00052610 evm_27.TU.AmTr_v1... Protein G1-like2 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AMTR_s00153p00047660 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.04 Archaeplastida
AMTR_s00155p00022580 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 Archaeplastida
AT1G16910 LSH8 Protein of unknown function (DUF640) 0.01 Archaeplastida
GSVIVT01020708001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 Archaeplastida
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.03 Archaeplastida
Gb_15426 No alias Protein G1-like5 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g61310.1 No alias Protein G1-like7 OS=Oryza sativa subsp. indica... 0.01 Archaeplastida
LOC_Os05g28040.1 No alias Protein G1-like9 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
LOC_Os05g39500.1 No alias Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Pp3c20_17990V3.1 No alias Protein of unknown function (DUF640) 0.02 Archaeplastida
Solyc04g009980.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.02 Archaeplastida
Solyc06g083860.2.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 Archaeplastida
Solyc07g062470.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
Solyc07g150147.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 Archaeplastida
Solyc10g007310.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
Solyc10g008000.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.05 Archaeplastida
Solyc12g014260.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 Archaeplastida
Zm00001e027222_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.04 Archaeplastida
Zm00001e031512_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.04 Archaeplastida
AMTR_s00153p00047660 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.04 LandPlants
AMTR_s00155p00022580 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 LandPlants
AT1G16910 LSH8 Protein of unknown function (DUF640) 0.01 LandPlants
GSVIVT01020708001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 LandPlants
LOC_Os05g28040.1 No alias Protein G1-like9 OS=Oryza sativa subsp. indica... 0.02 LandPlants
LOC_Os05g39500.1 No alias Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.03 LandPlants
Pp3c20_17990V3.1 No alias Protein of unknown function (DUF640) 0.02 LandPlants
Pp3c24_8490V3.1 No alias Protein of unknown function (DUF640) 0.02 LandPlants
Solyc05g055020.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1... 0.02 LandPlants
Solyc07g062470.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 LandPlants
Solyc07g150147.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.03 LandPlants
Solyc10g008000.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.04 LandPlants
Zm00001e012687_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.02 LandPlants
Zm00001e027222_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.03 LandPlants
AMTR_s00153p00047660 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6... 0.02 SeedPlants
AMTR_s00155p00022580 evm_27.TU.AmTr_v1... Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 SeedPlants
AT1G16910 LSH8 Protein of unknown function (DUF640) 0.01 SeedPlants
GSVIVT01020708001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 SeedPlants
Gb_15426 No alias Protein G1-like5 OS=Oryza sativa subsp. japonica... 0.01 SeedPlants
LOC_Os05g28040.1 No alias Protein G1-like9 OS=Oryza sativa subsp. indica... 0.02 SeedPlants
LOC_Os05g39500.1 No alias Protein G1-like8 OS=Oryza sativa subsp. japonica... 0.02 SeedPlants
Solyc07g062470.4.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 SeedPlants
Solyc10g008000.1.1 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... 0.02 SeedPlants
Zm00001e027222_P001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006936 ALOG_dom 13 133
No external refs found!