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  5. Pir_g55210

Pir_g55210


Description : not classified & original description: none


Gene families : OG0000319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g55210

Target Alias Description ECC score Gene Family Method Actions
Cre01.g019950 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Cre10.g420100 No alias DnaJ protein ERDJ3B OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
LOC_Os01g13760.1 LOC_Os01g13760 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species
Len_g00438 No alias co-chaperone *(Hsp40) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026140_P001 Zm00001e026140 co-chaperone (Hsp40) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 4 67
No external refs found!