AT5G58260

Description : oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor

Gene families : OG_01_0008576 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008576_tree ,
OG_02_0009332 (LandPlants) Phylogenetic Tree(s): OG_02_0009332_tree ,
OG_03_0012142 (SeedPlants) Phylogenetic Tree(s): OG_03_0012142_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G58260
Cluster	HCCA: Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00172700	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.09	Archaeplastida
GSVIVT01024526001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.14	Archaeplastida
LOC_Os01g66000.1	No alias	component NdhN of NDH subcomplex A	0.13	Archaeplastida
Mp5g18600.1	No alias	component NdhN of NDH subcomplex A	0.07	Archaeplastida
Pp3c3_15360V3.1	No alias	oxidoreductases, acting on NADH or NADPH, quinone or...	0.1	Archaeplastida
Solyc09g083150.4.1	No alias	no hits & (original description: none)	0.07	Archaeplastida
Zm00001e019059_P001	No alias	component NdhN of NDH subcomplex A	0.24	Archaeplastida
AMTR_s00077p00172700	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.08	LandPlants
GSVIVT01024526001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.12	LandPlants
LOC_Os01g66000.1	No alias	component NdhN of NDH subcomplex A	0.12	LandPlants
Mp5g18600.1	No alias	component NdhN of NDH subcomplex A	0.07	LandPlants
Pp3c3_15360V3.1	No alias	oxidoreductases, acting on NADH or NADPH, quinone or...	0.1	LandPlants
Solyc09g083150.4.1	No alias	no hits & (original description: none)	0.07	LandPlants
Zm00001e019059_P001	No alias	component NdhN of NDH subcomplex A	0.22	LandPlants
AMTR_s00077p00172700	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.09	SeedPlants
GSVIVT01024526001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.11	SeedPlants
LOC_Os01g66000.1	No alias	component NdhN of NDH subcomplex A	0.12	SeedPlants
Solyc09g083150.4.1	No alias	no hits & (original description: none)	0.06	SeedPlants
Zm00001e019059_P001	No alias	component NdhN of NDH subcomplex A	0.21	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	RCA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	TAS	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010207	photosystem II assembly	RCA	Interproscan
BP	GO:0010257	NADH dehydrogenase complex assembly	None	Extended
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IMP	Interproscan
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	None	Extended
CC	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)	TAS	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016109	tetraterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016117	carotenoid biosynthetic process	RCA	Interproscan
BP	GO:0016556	mRNA modification	RCA	Interproscan
BP	GO:0019252	starch biosynthetic process	RCA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR020874	NAD(P)H-quinone_OxRdtase_su_N	64	200

External Links

No external refs found!

AT5G58260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation