AT5G58230 (MSI1, MEE70, ATMSI1)


Aliases : MSI1, MEE70, ATMSI1

Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0002471 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002471_tree ,
OG_02_0002260 (LandPlants) Phylogenetic Tree(s): OG_02_0002260_tree ,
OG_03_0003543 (SeedPlants) Phylogenetic Tree(s): OG_03_0003543_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G58230
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Cre12.g523200 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Gb_03680 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.03 Archaeplastida
MA_70799g0010 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.03 Archaeplastida
Solyc01g104510.3.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 Archaeplastida
Solyc01g111590.4.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.04 Archaeplastida
Gb_03680 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 LandPlants
LOC_Os03g43890.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 LandPlants
MA_70799g0010 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.03 LandPlants
Solyc01g104510.3.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 LandPlants
Solyc01g111590.4.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.04 LandPlants
Zm00001e035979_P001 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.02 LandPlants
LOC_Os03g43890.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 SeedPlants
MA_70799g0010 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.03 SeedPlants
Solyc01g104510.3.1 No alias component CAF1c/MSI of CAF1 histone chaperone complex.... 0.02 SeedPlants
Zm00001e005035_P002 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e012412_P002 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.02 SeedPlants
Zm00001e035979_P001 No alias component CAF1c/MSI of CAF1 histone chaperone complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005634 nucleus TAS Interproscan
CC GO:0005677 chromatin silencing complex IDA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006349 regulation of gene expression by genetic imprinting IPI Interproscan
BP GO:0007275 multicellular organism development IMP Interproscan
BP GO:0008283 cell population proliferation IMP Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0009555 pollen development IMP Interproscan
BP GO:0009555 pollen development IGI Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
BP GO:0009909 regulation of flower development IMP Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010026 trichome differentiation IMP Interproscan
BP GO:0010214 seed coat development IMP Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0016570 histone modification RCA Interproscan
BP GO:0031507 heterochromatin assembly IMP Interproscan
BP GO:0031507 heterochromatin assembly RCA Interproscan
BP GO:0045787 positive regulation of cell cycle IGI Interproscan
BP GO:0045787 positive regulation of cell cycle RCA Interproscan
BP GO:0048316 seed development IMP Interproscan
BP GO:0048366 leaf development IMP Interproscan
BP GO:0048449 floral organ formation RCA Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 220 256
IPR001680 WD40_repeat 367 402
IPR001680 WD40_repeat 264 302
IPR022052 Histone-bd_RBBP4_N 19 88
No external refs found!