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  5. Pir_g54311

Pir_g54311


Description : not classified & original description: none


Gene families : OG0003810 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003810_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g54311
Cluster HCCA: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
Ala_g30062 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g30314 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33150 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g34995 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g47172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37333 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!