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  5. AMTR_s00015p00199070

AMTR_s00015p00199070 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00015.53

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase


Gene families : OG_01_0001739 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001739_tree ,
OG_02_0001723 (LandPlants) Phylogenetic Tree(s): OG_02_0001723_tree ,
OG_03_0001595 (SeedPlants) Phylogenetic Tree(s): OG_03_0001595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00015p00199070
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g47270.1 No alias lysine-specific demethylase (LDL/KDM1) 0.02 Archaeplastida
MA_25928g0010 No alias lysine-specific demethylase (LDL/KDM1) 0.03 Archaeplastida
Smo79938 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
Solyc11g008320.3.1 No alias lysine-specific demethylase (LDL/KDM1) 0.02 Archaeplastida
Zm00001e007263_P001 No alias lysine-specific demethylase (LDL/KDM1) 0.02 Archaeplastida
Zm00001e040280_P001 No alias lysine-specific demethylase (LDL/KDM1) 0.03 Archaeplastida
AT3G10390 FLD Flavin containing amine oxidoreductase family protein 0.02 LandPlants
LOC_Os04g47270.1 No alias lysine-specific demethylase (LDL/KDM1) 0.02 LandPlants
MA_25928g0010 No alias lysine-specific demethylase (LDL/KDM1) 0.03 LandPlants
Smo79938 No alias Chromatin organisation.histone modifications.histone... 0.02 LandPlants
Solyc11g008320.3.1 No alias lysine-specific demethylase (LDL/KDM1) 0.02 LandPlants
Zm00001e040280_P001 No alias lysine-specific demethylase (LDL/KDM1) 0.03 LandPlants
AMTR_s00015p00090420 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.03 SeedPlants
AT3G10390 FLD Flavin containing amine oxidoreductase family protein 0.02 SeedPlants
Gb_40551 No alias lysine-specific demethylase (LDL/KDM1) 0.02 SeedPlants
MA_25928g0010 No alias lysine-specific demethylase (LDL/KDM1) 0.03 SeedPlants
Solyc11g008320.3.1 No alias lysine-specific demethylase (LDL/KDM1) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007526 SWIRM 126 209
IPR002937 Amino_oxidase 235 660
No external refs found!