Smo414678 (PACid_15419031)

Aliases : PACid_15419031

Description : 16.2 secondary metabolism.phenylpropanoids Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. pinoresinol reductase 1 (PRR1) CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030) BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1) Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27 Bacteria - 779 Metazoa - 2 Fungi - 496 Plants - 600 Viruses - 0 Other Eukaryotes - 181 (source: NCBI BLink). & (p52575|ifr_medsa : 260.0

Gene families : OG_01_0000093 (Gene family) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Smo414678
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g47610 Os02g0705000 secondary... 0.04 Gene family
MA_10432947g0010 No alias 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.04 Gene family
MA_419572g0010 No alias secondary... 0.02 Gene family
MA_43637g0010 No alias secondary... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008030 NmrA-like 12 239
No external refs found!