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  5. Pir_g52881

Pir_g52881


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g52881

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00152p00054630 RHA2A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G72200 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G24015 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g012488 RHA3A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04740 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g48822 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aop_g60107 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g49099 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.01 OrthoFinder output from all 47 species
Ceric.20G013600.1 ATL5, Ceric.20G013600 not classified & original description: pacid=50566012... 0.03 OrthoFinder output from all 47 species
Dac_g36466 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03937 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g07523 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
LOC_Os01g16120.1 RHA2A, LOC_Os01g16120 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os03g05560.1 LOC_Os03g05560 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os03g22080.1 LOC_Os03g22080 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os04g16970.1 LOC_Os04g16970 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os05g11860.1 LOC_Os05g11860 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os06g07100.2 LOC_Os06g07100 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os10g30310.1 LOC_Os10g30310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g14676 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g57067 ATL4H not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16085 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g24030 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g61044 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008676 ATL4H not classified & original description: CDS=1-825 0.01 OrthoFinder output from all 47 species
Tin_g04482 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.06 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 32 75
No external refs found!