Smo414671 (PACid_15419025)


Aliases : PACid_15419025

Description : 16.2 secondary metabolism.phenylpropanoids Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. pinoresinol reductase 1 (PRR1) CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030) BEST Arabidopsis thaliana protein match is: pinoresinol reductase 2 (TAIR:AT4G13660.1) Has 2085 Blast hits to 2085 proteins in 479 species: Archae - 27 Bacteria - 779 Metazoa - 2 Fungi - 496 Plants - 600 Viruses - 0 Other Eukaryotes - 181 (source: NCBI BLink). & (p52575|ifr_medsa : 269.0


Gene families : OG_01_0000093 (Gene family) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo414671
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022642001 No alias 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.02 Gene family
GSVIVT01037073001 No alias No description available 0.02 Gene family
LOC_Os01g01650 Os01g0106300 No description available 0.03 Gene family
LOC_Os06g27770 Os06g0472200 16.8.5.1 secondary... 0.02 Gene family
LOC_Os06g28550 Os06g0479400 16.8.5.1 secondary... 0.03 Gene family
MA_10436472g0020 No alias 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.02 Gene family
MA_365984g0010 No alias No description available 0.02 Gene family
Solyc06g066160.3.1 Solyc06g066160.3 16.2 secondary metabolism.phenylpropanoids Encodes a... 0.02 Gene family
Zm00001d034357 GRMZM2G004036 16.8.5.1 secondary... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008030 NmrA-like 6 239
No external refs found!