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  5. Pir_g51970

Pir_g51970 (RVE1)


Aliases : RVE1

Description : transcription factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g51970
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272270 LHY1, LHY,... Multi-process regulation.circadian clock.core oscillator... 0.04 OrthoFinder output from all 47 species
AT1G01520 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G02840 LCL1 LHY/CCA1-like 1 0.02 OrthoFinder output from all 47 species
AT5G52660 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g33458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16814.t1 Aspi01Gene16814 transcription factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g07010.1 LOC_Os05g07010 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Pir_g50588 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21846 No alias circadian clock factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006465_P001 Zm00001e006465 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e037757_P001 Zm00001e037757 transcription factor (MYB-related). REVEILLE circadian... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 164 207
No external refs found!