Pir_g51766

Description : component *(eL6) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0001317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001317_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g51766
Cluster	HCCA: Cluster_200

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00218700	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
AT1G18540	No alias	Ribosomal protein L6 family protein	0.01	OrthoFinder output from all 47 species
AT1G74060	No alias	Ribosomal protein L6 family protein	0.03	OrthoFinder output from all 47 species
Adi_g112035	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Aev_g02805	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g53417	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g30780	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Ceric.29G025100.1	Ceric.29G025100	component *(eL6) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cre01.g011000	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Ehy_g29528	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01033532001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
MA_108607g0010	No alias	component RPL6 of LSU proteome component	0.01	OrthoFinder output from all 47 species
Msp_g07934	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 47 species
Pp3c14_4160V3.1	Pp3c14_4160	Ribosomal protein L6 family protein	0.01	OrthoFinder output from all 47 species
Ppi_g24337	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Sam_g08583	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Smo270686	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 47 species
Solyc11g012110.2.1	Solyc11g012110	component RPL6 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Spa_g44572	No alias	component *(eL6) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Zm00001e014979_P001	Zm00001e014979	component RPL6 of LSU proteome component	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005568	Ribosomal_L6_N	3	58
IPR000915	60S_ribosomal_L6E	124	188

External Links

No external refs found!

Pir_g51766

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation