AT5G54650 (ATFH5, Fh5)

Aliases : ATFH5, Fh5

Description : formin homology5

Gene families : OG_01_0000460 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000460_tree ,
OG_02_0000315 (LandPlants) Phylogenetic Tree(s): OG_02_0000315_tree ,
OG_03_0000245 (SeedPlants) Phylogenetic Tree(s): OG_03_0000245_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G54650
Cluster	HCCA: Cluster_81

Target	Alias	Description	ECC score	Gene Family Method
AT1G59910	No alias	Actin-binding FH2 (formin homology 2) family protein	0.04	Archaeplastida
LOC_Os07g39920.1	No alias	group-I formin actin filament elongation factor	0.02	Archaeplastida
MA_10431990g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp5g03400.1	No alias	group-I formin actin filament elongation factor	0.02	Archaeplastida
Solyc05g046120.3.1	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
Zm00001e004448_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e010517_P001	No alias	group-I formin actin filament elongation factor	0.03	Archaeplastida
AMTR_s00055p00223690	evm_27.TU.AmTr_v1...	Cytoskeleton.microfilament network.actin...	0.02	LandPlants
AT1G59910	No alias	Actin-binding FH2 (formin homology 2) family protein	0.03	LandPlants
MA_10431990g0010	No alias	no hits & (original description: none)	0.03	LandPlants
Zm00001e004448_P002	No alias	no hits & (original description: none)	0.02	LandPlants
AMTR_s00055p00223690	evm_27.TU.AmTr_v1...	Cytoskeleton.microfilament network.actin...	0.02	SeedPlants
MA_10431990g0010	No alias	no hits & (original description: none)	0.03	SeedPlants
Solyc05g046120.3.1	No alias	group-I formin actin filament elongation factor	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008154	actin polymerization or depolymerization	None	Extended
CC	GO:0009524	phragmoplast	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009960	endosperm development	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010638	positive regulation of organelle organization	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030041	actin filament polymerization	IDA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	None	Extended
BP	GO:0030838	positive regulation of actin filament polymerization	None	Extended
BP	GO:0031334	positive regulation of protein-containing complex assembly	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032273	positive regulation of protein polymerization	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044089	positive regulation of cellular component biogenesis	None	Extended
BP	GO:0045010	actin nucleation	IDA	Interproscan
BP	GO:0048317	seed morphogenesis	IGI	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051258	protein polymerization	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051495	positive regulation of cytoskeleton organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902905	positive regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR015425	FH2_Formin	436	839

External Links

No external refs found!

AT5G54650 (ATFH5, Fh5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation